Scientific program NPC 2018
Wednesday April 18th.
09:00-10:00 Registration at Radisson Blu Royal Hotel, Bergen
10:00-12:00 Workshop Protein identification (Dræggen 1)
11:00-11:20 Coffee break
12:00-13:00 Lunch
13:00-14:00 Workshop Protein identification continues (Dræggen 1)
14:00-14:20 Coffee break and registration
14:20-18:00 Workshop MaxQuant (Dræggen 3)
16:00-16:20 Coffee break
14:20-18:00 Workshop Protein identification continues (Dræggen 1)
16:00-16:20 Coffee break
Thursday April 19th.
All lectures will be in Kongesal 3-4
08:30-09:00 Registration at Radisson Blu Royal Hotel, Bergen
09:00-09:50 Introduction and overview of proteomics in the Nordic countries.
Short presentations by the presidents of the four Nordic Proteomics Societies.
09:00-09:20 Welcome and presentation of the Norwegian proteomics society by Frode Berven, President of the
Norwegian Proteomics Society
09:20-09:30 Overview of the Swedish Proteomics Society by Sven Kjellström, President of the Swedish Proteomics Society
09:30-09:40 Overview of the Finish Proteomics Society by Maciej Lalowski, President of the Finish Proteomics Society
09:40-09:50 Overview of the Danish Proteomics Society by Ole Nørregaard Jensen, President of the Danish Proteomics
Society
09:50-12:00 Bioinformatics in proteomics
09:50-10:20 Main lecture by Jürgen Cox. The MaxQuant and Perseus Computational Platforms for Comprehensive Analysis
of Large-scale (Prote)Omics Data
10:20-10:50 Coffee break, Posters, Vendor exhibition and mingling
10:50-11:00 Harald Barsnes. CSF-PR 2.0: an interactive literature guide to quantitative cerebrospinal fluid mass spectrometry
data from neurodegenerative disorders.
11:00-11:10 Bram Burger. What do pathway databases (not) contain: An exploration of Reactome.
11:10-11:20 Niina Lietzén. Characterization and non-parametric modeling of the developing serum proteome during early
childhood.
11:20-11:30 Magnus Ø. Arntzen. Metaproteomics: Unique challenges and opportunities.
11:30-11:40 Bernd Thiede. Customized databases for the identification of protein species-specific peptides.
11:40-12:00 Presentation by Thermo Fisher Scientific. Best of both: a novel hybrid PRM/DIA method on the Q Exactive HF-X”. Simonas Savickas, Dept. of Biotechnology and Biomedicine, Technical University of Denmark.
12:00-13:00 Lunch
13:00-13:40 Posters, Vendor exhibition and mingling
13:40-16:00 Proteomics in health and disease
13:40-14:00 Presentation by Sciex. Investigation of cancer cell models to inform beta-blocker use as a breast cancer
therapeutic. Dr David Boocock Group Leader of the Clinical Proteomics group, John van Geest Cancer Research
Centre Nottingham Trent University.
14:00-14:30 Main lecture by Gyorgy Marco-Varga. Cancer moonshot center Lund Sweden.
14:30-14:40 Alicia Lundby. High-resolution proteomics study of live human heart samples reveals chamber-specific
differences and high abundance of disease proteins.
14:40-14:50 Jorunn Stamnaes. Proteome dynamics of celiac small intestine in response to gluten challenge.
14:50-15:10 Coffee break, Posters, Vendor exhibition and mingling
15:10-15:20 Kenneth Finne. Laser capture microdissection and proteomics analysis of the tumor microenvironment in
breast cancer.
15:20-15:40 Sven Kjellström. Wound fluid Peptidomics.
15:40-15:50 Ragnhild Reehorst Lereim. Establishment of absolute parallel reaction monitoring assays against Multiple
sclerosis biomarkers in cerebrospinal fluid.
15:50-16:10 Johan Gobom. A novel quantification-driven proteomic strategy identifies an endogenous peptide of
pleiotrophin as a new biomarker of Alzheimer's disease
16:10-17:00 Posters, Vendor exhibition and mingling
17:00-17:45 Annual meeting for the Norwegian Proteomics Society.
18:30- Walking from Radisson Bryggen to Fløibanen for conference dinner.
18:45-19:00 Transport with Fløibanen to the top of mount Fløien.
19:00-19:30 Apéritif at Fløien Folkerestaurant
19:30- Dinner Fløien Folkerestaurant
~22:30 Transport by Fløibanen back down to the city
Friday April 20th
09:00-12:00 Proteomics applications, methods and technology
09:00-09:30 Main lecture by Sophia Hober. The Human Protein Atlas - strategies, technologies and results
09:30-10:10 Fridtjof Lund-Johansen. Array-based antibody validation.
10:10-10:20 Victor Greiff. Dissecting antibody repertoires using systems immunogenomics.
10:20-11:00 Coffee break, posters, Vendor exhibition and mingling
11:00-11:10 Hanne Haslene-Hox. Proteomic profiling of circulating Extracellular Vesicles: a window into the brain in
neuropsychiatric disease.
11:10-11:20 Henriette Engen Berg. Development of nanoLC column technology for proteomic studies.
11:20-11:40 Ole Nørregaard Jensen. Elucidation of histone proteoform dynamics during aging by using middle-down mass
spectrometry
11:40-12:00 Presentation by Promega. The Ever Growing Mass Spec Sample Prep Toolbox. Michael Rosenblatt. Group Leader
Mass Spectrometry (Promega Corporation). University of Illinois at Urbana-Champaign
12:00-13:00 Lunch
13:00-16:00 Post translational modifications, qualitative and quantitative proteomics
13:00-13:10 Presentation by Bruker. timsTOF Pro/PASEF – the premier solution for Proteomics. Michael Greig Director US
Pharma/Biopharma Business Life Science Mass Spectrometry
13:10-13:40 Main talk by Jesper Olsen. Dissecting Cell Signaling Networks by Quantitative Phosphoproteomics.
13:40-13:50 Maria Hernandez-Valladares. MS-based phosphosproteomics on acute myeloid leukemia patient samples.
13:50-14:00 Natalia Battchikova. Interplay of the SpkG kinase and the Slr0151 protein in phosphorylation of Ferredoxin 5 in
Synechocystis 6803.
14:00-14:10 Daniela M. Pampanin. Screening for naphthalene and chrysene protein adducts in plasma of exposed Atlantic
cod (Gadus morhua).
14:10-14:50 Coffee break, Posters, Vendor exhibition and mingling.
14:50-15:10 Maciej Lalowski. Characterizing the key metabolic pathways of the neonatal mouse heart using a quantitative
combinatorial omics approach.
15:10-15:20 Magnus E. Jakobsson. Site-specific methylation of eEF1A shapes the proteome
15:20-15:30 Adrian Drazic. Proteomics analyses reveal that actin is N-terminal acetylated by NAA80 – a novel regulator of
cytoskeleton dynamics.
15:30-15:40 Eva Veiseth-Kent. Muscle protein expression profiles affected by growth hormone treatment in cattle.
15:40-15:50 Richard Kumaran Kandasamy. Quantitative proteomics to study the dynamics of antiviral and inflammatory
signaling.
15:50-16:00 End of the conference – President of the Norwegian Proteomics Society, Frode Berven